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🚀 Getting Started

  • Purpose
  • Concepts
  • Installation
  • Scripting in Fiji

🪄 How-to guides

  • Searching for Ops in the Environment
  • Calling Ops with the OpBuilder
  • Reasoning about Ops

⚙️ Examples

  • Richardson-Lucy Total Variation Deconvolution
  • FLIM Analysis
  • Gaussian Blur Subtraction
  • 3D Analysis and Visualization
  • Fast Non-Local Means Denoise with OpenCV
  • Spatially Adaptive Colocalization Analysis
  • SciJava Ops from Python
  • Volumetric Labeling and 3D Geometry Analysis

🛠️ Development

  • Writing Your Own Op Package
  • Parameter Conversion for Developers
  • Migrating Ops Written for ImageJ Ops
  • SciJava Ops Benchmarks

📚 Papers

  • SciJava Ops: An Improved Algorithms Framework for Fiji and Beyond
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